Abou-Jawdah, Y, El Mohtar, C, Atamian, H and Sobh, H 2006. First report of Tomato chlorosis virus in Lebanon.
Plant Dis. 90:378
Accotto, G, Vaira, A, Vecchiati, M, Finetti Sialer, M, Gallitelli, D and Davino, M 2001. First report of Tomato chlorosis virus in Italy.
Plant Dis. 85:1208
Albuquerque, LC, Varsani, A, Fernandes, FR, Pinheiro, B, Martin, DP, Ferreira, PDTO, Lemos, TO and Inoue-Nagata, AK 2012. Further characterization of tomato-infecting begomoviruses in Brazil.
Arch Virol. 157:747-752.
Alvarez-Ruiz, P, Jimenez, C, Leyva-López, NE and Méndez-Lozano, J 2007. First report of Tomato chlorosis virus infecting tomato crops in Sinaloa, Mexico.
Plant Pathol. 56:1043
Aranda, MA, Fraile, A, Dopazo, J, Malpica, JM and García-Arenal, F 1997. Contribution of mutation and RNA recombination to the evolution of a plant pathogenic RNA.
J Mol Evol. 44:81-88.
Arruabarrena, A, Rubio, L, González-Arcos, M, Maeso, D, Fonseca, M and Boiteux, L 2015. First report of Tomato chlorosis virus infecting tomato crops in Uruguay.
Plant Dis. 99:895
Barbosa, J, Teixeira, A, Moreira, A, Camargo, L, Filho, AB, Kitajima, E and Rezende, J 2008. First report of Tomato chlorosis virus infecting tomato crops in Brazil.
Plant Dis. 92:1709
Barbosa, J, Teixeira, L and Rezende, J 2010. First report on the susceptibility of sweet pepper crops to Tomato chlorosis virus in Brazil.
Plant Dis. 94:374
Barton, HD, Rohani, P, Stallknecht, DE, Brown, J and Drake, JM 2014. Subtype diversity and reassortment potential for co-circulating avian influenza viruses at a diversity hot spot.
J Anim Ecol. 83:566-575.
Bese, G, Bóka, K, Krizbai, L and Takács, A 2011. First report of Tomato chlorosis virus in tomato from Hungary.
Plant Dis. 95:363
Castro, R, Hernandez, E, Mora, F, Ramirez, P and Hammond, R 2009. First report of Tomato chlorosis virus in tomato in Costa Rica.
Plant Dis. 93:970
Çevik, B and Erkıß, G 2008. First report of Tomato chlorosis virus in Turkey.
Plant Pathol. 57:767-767.
Dalmon, A, Bouyer, S, Cailly, M, Girard, M, Lecoq, H, Desbiez, C and Jacquemond, M 2005. First report of Tomato chlorosis virus and Tomato infectious chlorosis virus in tomato crops in France.
Plant Dis. 89:1243
Domingo, E and Holland, JJ 1994. Mutation rates and rapid evolution of RNA viruses. In: The evolutionary biology of viruses, eds. by SS Morse, 161-184. Raven Press, NY, USA.
Dovas, C, Katis, N and Avgelis, A 2002. Multiplex detection of criniviruses associated with epidemics of a yellowing disease of tomato in Greece.
Plant Dis. 86:1345-1349.
Fiallo-Olivé, E, Hamed, A, Moriones, E and Navas-Castillo, J 2011. First report of Tomato chlorosis virus infecting tomato in Sudan.
Plant Dis. 95:1592
Font, M, Juárez, M, Martínez, O and Jordá, C 2004. Current status and newly discovered natural hosts of Tomato infectious chlorosis virus and Tomato chlorosis virus in Spain.
Plant Dis. 88:82
Fortes, IM and Navas-Castillo, J 2012. Potato, an experimental and natural host of the crinivirus Tomato chlorosis virus.
Eur J Plant Pathol. 134:81-86.
Fuller, TL, Gilbert, M, Martin, V, Cappelle, J, Hosseini, P, Njabo, KY, Aziz, SA, Xiao, X, Daszak, P and Smith, TB 2013. Predicting hotspots for influenza virus reassortment.
Emerg Infect Dis. 19:581-588.
Hanssen, IM, Lapidot, M and Thomma, BP 2010. Emerging viral diseases of tomato crops.
Mol Plant-Microbe Interact. 23:539-548.
Hirota, T, Natsuaki, T, Murai, T, Nishigawa, H, Niibori, K, Goto, K, Hartono, S, Suastika, G and Okuda, S 2010. Yellowing disease of tomato caused by Tomato chlorosis virus newly recognized in Japan.
J Gen Plant Pathol. 76:168-171.
Jacquemond, M, Verdin, E, Dalmon, A, Guilbaud, L and Gognalons, P 2009. Serological and molecular detection of Tomato chlorosis virus and Tomato infectious chlorosis virus in tomato.
Plant Pathol. 58:210-220.
Johnson, M, Zaretskaya, I, Raytselis, Y, Merezhuk, Y, McGinnism, S and Madden, TL 2008. NCBI BLAST: a better web interface.
Nucleic Acids Res. 36:W5-W9.
Karasev, AV 2000. Genetic diversity and evolution of closteroviruses.
Annu Rev Phytopathol. 38:293-324.
Kataya, A, Stavridou, E, Farhan, K and Livieratos, I 2008. Nucleotide sequence analysis and detection of a Greek isolate of Tomato chlorosis virus.
Plant Pathol. 57:819-824.
Kearse, M, Moir, R, Wilson, A, Stones-Havas, S, Cheung, M, Sturrock, S, Buxton, S, Cooper, A, Markowitz, S and Duran, C 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.
Bioinformatics. 28:1647-1649.
Kimura, M 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.
J Mol Evol. 16:111-120.
Lett, J, Hoareau, M, Reynaud, B, Saison, A, Hostachy, B, Lobin, K and Benimadhu, S 2009. First report of Tomato chlorosis virus in tomato on Mauritius Island.
Plant Dis. 93:111
Liu, H-Y, Wisler, G and Duffus, J 2000. Particle lengths of whitefly-transmitted criniviruses.
Plant Dis. 84:803-805.
Louro, D, Accotto, G and Vaira, A 2000. Occurrence and diagnosis of Tomato chlorosis virus in Portugal. Eur J Plant Pathol. 106:589-592.
Lozano, G, Moriones, E and Navas-Castillo, J 2004. First report of sweet pepper (Capsicum annuum) as a natural host plant for Tomato chlorosis virus.
Plant Dis. 88:224
Lozano, G, Moriones, E and Navas-Castillo, J 2006. Complete nucleotide sequence of the RNA2 of the crinivirus Tomato chlorosis virus.
Arch Virol. 151:581-587.
Marshall, N, Priyamvada, L, Ende, Z, Steel, J and Lowen, AC 2013. Influenza virus reassortment occurs with high frequency in the absence of segment mismatch.
PLoS Pathog. 9:e1003421
Morris, J, Steel, E, Smith, P, Boonham, N, Spence, N and Barker, I 2006. Host range studies for Tomato chlorosis virus, and Cucumber vein yellowing virus transmitted by Bemisia tabaci (Gennadius).
Eur J Plant Pathol. 114:265-273.
Nagy, PD 2008. Recombination in plant RNA viruses. Plant virus evolution. 133-156. Springer,
Orílio, AF, Fortes, IM and Navas-Castillo, J 2014. Infectious cDNA clones of the crinivirus Tomato chlorosis virus are competent for systemic plant infection and whitefly-transmission.
Virology. 464:365-374.
Rozen, S and Skaletsky, H 2000. Primer3 on the WWW for general users and for biologist programmers. In:
Bioinformatics Methods and Protocols Methods in Molecular Biology™, 132:eds. by S Misener and SA Krawetz, Humana Press, Totowa, NJ.
Savory, FR, Varma, V and Ramakrishnan, U 2014. Identifying geographic hot spots of reassortment in a multipartite plant virus.
Evol Appl. 7:569-579.
Segev, L, Wintermantel, W, Polston, J and Lapidot, M 2004. First report of Tomato chlorosis virus in Israel.
Plant Dis. 88:1160
Simon, A and Bujarski, J 1994. RNA-RNA recombination and evolution in virus-infected plants.
Annu Rev Phytopathol. 32:337-362.
Solórzano-Morales, A, Barboza, N, Hernández, E, Mora-Umaña, F, Ramírez, P and Hammond, R 2011. Newly discovered natural hosts of Tomato chlorosis virus in Costa Rica.
Plant Dis. 95:497
Sundaraj, S, Srinivasan, R, Webster, C, Adkins, S, Perry, K and Riley, D 2011. First report of Tomato chlorosis virus infecting tomato in Georgia.
Plant Dis. 95:881
Tamura, K and Nei, M 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.
Mol Biol Evol. 10:512-526.
Tamura, K, Stecher, G, Peterson, D, Filipski, A and Kumar, S 2013. MEGA6: molecular evolutionary genetics analysis version 6.0.
Mol Biol Evol. 30:2725-2729.
Thekke-Veetil, T, Polashock, JJ, Marn, MV, Plesko, IM, Schilder, AC, Keller, KE, Martin, RR and Tzanetakis, IE 2015. Population structure of blueberry mosaic associated virus: Evidence of reassortment in geographically distinct isolates.
Virus Res. 201:79-84.
Thompson, JD, Gibson, T and Higgins, DG 2002. Multiple sequence alignment using ClustalW and ClustalX.
Curr Protoc Bioinformatics. 2:2-3.
Trenado, HP, Fortes, IM, Louro, D and Navas-Castillo, J 2007. Physalis ixocarpa and P. peruviana, new natural hosts of Tomato chlorosis virus.
Eur J Plant Pathol. 118:193-196.
Tsai, W, Shih, S, Green, S, Hanson, P and Liu, H 2004. First report of the occurrence of Tomato chlorosis virus and Tomato infectious chlorosis virus in Taiwan.
Plant Dis. 88:311
Vargas, J, Hammond, R, Hernández, E, Barboza, N, Mora, F and Ramírez, P 2011. First report of Tomato chlorosis virus infecting sweet pepper in Costa Rica.
Plant Dis. 95:1482
Vijaykrishna, D, Mukerji, R and Smith, GJ 2015. RNA virus reassortment: an evolutionary mechanism for host jumps and immune evasion.
PLoS Pathog. 11:e1004902
Wille, M, Robertson, GJ, Whitney, H, Bishop, MA, Runstadler, JA and Lang, AS 2011. Extensive geographic mosaicism in avian influenza viruses from gulls in the northern hemisphere.
PLoS One. 6:e20664
Wintermantel, W, Polston, J, Escudero, J and Paoli, E 2001. First report of Tomato chlorosis virus in Puerto Rico.
Plant Dis. 85:228
Wintermantel, W, Wisler, G, Anchieta, A, Liu, H-Y, Karasev, A and Tzanetakis, I 2005. The complete nucleotide sequence and genome organization of Tomato chlorosis virus.
Arch Virol. 150:2287-2298.
Wintermantel, WM and Wisler, GC 2006. Vector specificity, host range, and genetic diversity of Tomato chlorosis virus.
Plant Dis. 90:814-819.
Wisler, G, Duffus, J, Liu, H-Y and Li, R 1998a. Ecology and epidemiology of whitefly-transmitted closteroviruses.
Plant Dis. 82:270-280.
Wisler, G, Li, R, Liu, H-Y, Lowry, D and Duffus, J 1998b. Tomato chlorosis virus: a new whitefly-transmitted, phloem-limited, bipartite closterovirus of tomato.
Phytopathology. 88:402-409.
Zhao, L-M, Li, G, Gao, Y, Zhu, Y-R, Liu, J and Zhu, X-P 2015. Reverse transcription loop-mediated isothermal amplification assay for detecting Tomato chlorosis virus.
J Virol Methods. 213:93-97.
Zhao, LM, Li, G, Gao, Y, Liu, YJ, Sun, GZ and Zhu, XP 2014. Molecular detection and complete genome sequences of Tomato chlorosis virus isolates from infectious outbreaks in China.
J Phytopathol. 162:627-634.
Zhao, R, Wang, N, Wang, R, Chen, H, Shi, Y, Fan, Z and Zhou, T 2013a. Characterization and full genome sequence analysis of a Chinese isolate of Tomato chlorosis virus.
Acta Virol. 58:92-94.
Zhao, R, Wang, R, Wang, N, Fan, Z, Zhou, T, Shi, Y and Chai, M 2013b. First Report of Tomato chlorosis virus in China.
Plant Dis. 97:1123